Difference between revisions of "CsbX"

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= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
 +
{{SubtiWiki regulon|[[CcpA regulon]]}},
 
{{SubtiWiki regulon|[[SigB regulon]]}},
 
{{SubtiWiki regulon|[[SigB regulon]]}},
 
{{SubtiWiki regulon|[[SigF regulon]]}},
 
{{SubtiWiki regulon|[[SigF regulon]]}},
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=== Additional information===
 
=== Additional information===
 
 
  
  
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** expressed during sporulation in the forespore ([[SigF]], [[SigG]]) {{PubMed|16497325,9099855}}
 
** expressed during sporulation in the forespore ([[SigF]], [[SigG]]) {{PubMed|16497325,9099855}}
 
** induced by stress ([[SigB]]) {{PubMed|11544224,9099855}}
 
** induced by stress ([[SigB]]) {{PubMed|11544224,9099855}}
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** subject to carbon catabolite repression ([[CcpA]]) {{PubMed|22900538}}
  
 
* '''Regulatory mechanism:'''
 
* '''Regulatory mechanism:'''
 +
** [[CcpA]]:  transcription repression {{PubMed|22900538}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''
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=References=
 
=References=
  
<pubmed>9099855,,11544224, </pubmed>
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<pubmed>9099855,22900538,11544224, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 15:56, 21 August 2012

  • Description: general stress protein

Gene name csbX
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: csbX
MW, pI 47 kDa, 8.818
Gene length, protein length 1305 bp, 435 aa
Immediate neighbours bofC, yrbE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CsbX context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CsbX expression.png















Categories containing this gene/protein

sporulation proteins, general stress proteins (controlled by SigB), membrane proteins

This gene is a member of the following regulons

CcpA regulon, SigB regulon, SigF regulon, SigG regulon

The gene

Basic information

  • Locus tag: BSU27760

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YoaB

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:
    • forespore intermembrane space (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Bogumiła C Marciniak, Monika Pabijaniak, Anne de Jong, Robert Dűhring, Gerald Seidel, Wolfgang Hillen, Oscar P Kuipers
High- and low-affinity cre boxes for CcpA binding in Bacillus subtilis revealed by genome-wide analysis.
BMC Genomics: 2012, 13;401
[PubMed:22900538] [WorldCat.org] [DOI] (I e)

A Petersohn, M Brigulla, S Haas, J D Hoheisel, U Völker, M Hecker
Global analysis of the general stress response of Bacillus subtilis.
J Bacteriol: 2001, 183(19);5617-31
[PubMed:11544224] [WorldCat.org] [DOI] (P p)

M Gomez, S M Cutting
Identification of a new sigmaB-controlled gene, csbX, in Bacillus subtilis.
Gene: 1997, 188(1);29-33
[PubMed:9099855] [WorldCat.org] [DOI] (P p)