Difference between revisions of "YceF"

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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU02920 yceF]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 7.452   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 7.452   

Revision as of 09:30, 8 August 2012

  • Description: general stress protein, similar to tellurium resistance protein

Gene name yceF
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yceF
MW, pI 29 kDa, 7.452
Gene length, protein length 771 bp, 257 aa
Immediate neighbours yceE, yceG
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YceF context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YceF expression.png
















Categories containing this gene/protein

general stress proteins (controlled by SigB), cell envelope stress proteins (controlled by SigM, V, W, X, Y), resistance against toxic metals, membrane proteins

This gene is a member of the following regulons

SigB regulon, SigM regulon, SigW regulon, Sigx regulon

The gene

Basic information

  • Locus tag: BSU02920

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: terC family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711] [WorldCat.org] [DOI] (I p)

Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421] [WorldCat.org] [DOI] (P p)

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

Min Cao, Phil A Kobel, Maud M Morshedi, Ming Fang Winston Wu, Chris Paddon, John D Helmann
Defining the Bacillus subtilis sigma(W) regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches.
J Mol Biol: 2002, 316(3);443-57
[PubMed:11866510] [WorldCat.org] [DOI] (P p)

D E Taylor
Bacterial tellurite resistance.
Trends Microbiol: 1999, 7(3);111-5
[PubMed:10203839] [WorldCat.org] [DOI] (P p)