Difference between revisions of "NarK"

From SubtiWiki
Jump to: navigation, search
Line 13: Line 13:
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || nitrate respiration, nitrite export  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || nitrate respiration, nitrite export  
 +
|-
 +
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU37320 narK]
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Alternative nitrogen sources]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/other_nitrogen_sources/index.html Alternative nitrogen sources]'''

Revision as of 17:00, 7 August 2012

  • Description: nitrite extrusion protein

Gene name narK
Synonyms
Essential no
Product nitrite extrusion protein
Function nitrate respiration, nitrite export
Gene expression levels in SubtiExpress: narK
Metabolic function and regulation of this protein in SubtiPathways:
Alternative nitrogen sources
MW, pI 42 kDa, 10.099
Gene length, protein length 1185 bp, 395 aa
Immediate neighbours fnr, argS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
NarK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
NarK expression.png


























Categories containing this gene/protein

transporters/ other, respiration, membrane proteins

This gene is a member of the following regulons

Fnr regulon, NsrR regulon

The gene

Basic information

  • Locus tag: BSU37320

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): NasA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed under anaerobic conditions (Fnr) PubMed
    • induced by nitric oxide under anaerobic conditions (NsrR) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References