Difference between revisions of "AmyD"

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|style="background:#ABCDEF;" align="center"|'''Function''' || probably melibiose uptake
 
|style="background:#ABCDEF;" align="center"|'''Function''' || probably melibiose uptake
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU30280 amyD]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/AmyD AmyD]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/AmyD AmyD]

Revision as of 15:08, 7 August 2012

Gene name amyD
Synonyms
Essential no
Product ABC transporter (permease)
Function probably melibiose uptake
Gene expression levels in SubtiExpress: amyD
Interactions involving this protein in SubtInteract: AmyD
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 34 kDa, 9.077
Gene length, protein length 909 bp, 303 aa
Immediate neighbours msmE, amyC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
AmyD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AmyD expression.png




























Categories containing this gene/protein

ABC transporters, utilization of specific carbon sources, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU30280

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)