Difference between revisions of "DctR"

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* '''Description:''' [[two-component systems|two-component]] response regulator, regulation of the ''[[dctS]]-[[dctR]]-[[dctP]]'' operon <br/><br/>
  
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the ''[[dctS]]-[[dctR]]-[[dctP]]'' operon
 
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the ''[[dctS]]-[[dctR]]-[[dctP]]'' operon
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU04460 dctR]
 
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/DctR DctR]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/DctR DctR]
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|colspan="2" | '''Genetic context''' <br/> [[Image:dctR_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:dctR_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dctR_499365_500045_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:dctR_expression.png|500px]]
 
 
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* '''Operon:''' ''[[dctS]]-[[dctR]]-[[dctP]]'' {{PubMed|10708364}}
 
* '''Operon:''' ''[[dctS]]-[[dctR]]-[[dctP]]'' {{PubMed|10708364}}
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=dctR_499365_500045_1 dctR] {{PubMed|22383849}}
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* '''[[Sigma factor]]:'''  
 
 
* '''Sigma factor:'''  
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''
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* '''Additional information:'''  
  
 
=Biological materials =
 
=Biological materials =

Revision as of 11:31, 7 August 2012

Gene name dctR
Synonyms ydbG
Essential no
Product two-component response regulator
Function regulation of the dctS-dctR-dctP operon
Interactions involving this protein in SubtInteract: DctR
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 25 kDa, 8.6
Gene length, protein length 678 bp, 226 aa
Immediate neighbours dctS, dctP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
DctR context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

utilization of specific carbon sources, transcription factors and their control, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU04460

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated by DctS on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity: phosphorylation likely affects DNA-binding activity

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Kei Asai, Sang-Hoon Baik, Yasuhiro Kasahara, Shigeki Moriya, Naotake Ogasawara
Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis.
Microbiology (Reading): 2000, 146 ( Pt 2);263-271
[PubMed:10708364] [WorldCat.org] [DOI] (P p)

C Fabret, V A Feher, J A Hoch
Two-component signal transduction in Bacillus subtilis: how one organism sees its world.
J Bacteriol: 1999, 181(7);1975-83
[PubMed:10094672] [WorldCat.org] [DOI] (P p)