Difference between revisions of "AdaB"

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* '''Description:''' O6-methylguanine-DNA methyltransferase <br/><br/>
  
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || adaptive response to alkylative DNA damage
 
|style="background:#ABCDEF;" align="center"|'''Function''' || adaptive response to alkylative DNA damage
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU01820 adaB]
 
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 6.152   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 6.152   
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|colspan="2" | '''Genetic context''' <br/> [[Image:adaB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:adaB_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=adaB_204351_204890_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:adaB_expression.png|500px]]
 
 
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* '''Operon:''' ''[[adaA]]-[[adaB]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/2120677 PubMed]
 
* '''Operon:''' ''[[adaA]]-[[adaB]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/2120677 PubMed]
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=adaB_204351_204890_1 adaB] {{PubMed|22383849}}
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* '''[[Sigma factor]]:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/2120677 PubMed]
 
 
* '''Sigma factor:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/2120677 PubMed]
 
  
 
* '''Regulation:''' positive control by [[AdaA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/2120677 PubMed]
 
* '''Regulation:''' positive control by [[AdaA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/2120677 PubMed]

Revision as of 10:16, 7 August 2012

  • Description: O6-methylguanine-DNA methyltransferase

Gene name adaB
Synonyms
Essential no
Product O6-methylguanine-DNA methyltransferase
Function adaptive response to alkylative DNA damage
MW, pI 19 kDa, 6.152
Gene length, protein length 537 bp, 179 aa
Immediate neighbours adaA, ndhF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
AdaB context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

DNA repair/ recombination

This gene is a member of the following regulons

AdaA regulon

The gene

Basic information

  • Locus tag: BSU01820

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: DNA (containing 6-O-methylguanine) + protein L-cysteine = DNA (without 6-O-methylguanine) + protein S-methyl-L-cysteine (according to Swiss-Prot)
  • Protein family: MGMT family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

F Morohoshi, K Hayashi, N Munakata
Bacillus subtilis ada operon encodes two DNA alkyltransferases.
Nucleic Acids Res: 1990, 18(18);5473-80
[PubMed:2120677] [WorldCat.org] [DOI] (P p)