Difference between revisions of "NrnB"
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|style="background:#ABCDEF;" align="center"|'''Function''' || degradation of RNA oligonucleotides | |style="background:#ABCDEF;" align="center"|'''Function''' || degradation of RNA oligonucleotides | ||
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+ | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU18200 nrnB] | ||
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 46 kDa, 5.026 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 46 kDa, 5.026 |
Revision as of 10:14, 7 August 2012
- Description: oligoribonuclease (nano-RNase)
Gene name | nrnB |
Synonyms | yngD |
Essential | no |
Product | nano-RNase B |
Function | degradation of RNA oligonucleotides |
Gene expression levels in SubtiExpress: nrnB | |
MW, pI | 46 kDa, 5.026 |
Gene length, protein length | 1197 bp, 399 aa |
Immediate neighbours | yngC, yngE |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context ![]() This image was kindly provided by SubtiList
| |
Expression at a glance PubMed![]() |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18200
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: degradation of RNA oligonucleotides PubMed
- Protein family: DHH/DHHA1 protein family of phosphoesterases PubMed
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O31824
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Ming Fang, Wencke-Maria Zeisberg, Ciaran Condon, Vasily Ogryzko, Antoine Danchin, Undine Mechold
Degradation of nanoRNA is performed by multiple redundant RNases in Bacillus subtilis.
Nucleic Acids Res: 2009, 37(15);5114-25
[PubMed:19553197]
[WorldCat.org]
[DOI]
(I p)