TrmD

• Description: tRNA methyltransferase
  
  

Gene name	trmD
Synonyms
Essential	yes PubMed
Product	tRNA methyltransferase
Function	tRNA modification
Gene expression levels in SubtiExpress: trmD
MW, pI	27 kDa, 5.309
Gene length, protein length	729 bp, 243 aa
Immediate neighbours	rimM, rplS
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

translation, essential genes

The gene

Basic information

• Locus tag: BSU16030

Phenotypes of a mutant

essential PubMed

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N(1)-methylguanine (according to Swiss-Prot)

• Protein family: RNA methyltransferase trmD family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:
  • cytoplasm (according to Swiss-Prot)

Database entries

• Structure:

• UniProt: O31741

• KEGG entry: [2]

• E.C. number: 2.1.1.31

Expression and regulation

• Operon:

• Expression browser: trmD PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody: