Difference between revisions of "YabE"
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| − | + | * '''Description:''' similar to cell wall binding protein <br/><br/> | |
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 47 kDa, 9.282 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 47 kDa, 9.282 | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:yabE_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yabE_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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__TOC__ | __TOC__ | ||
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* '''Operon:''' ''yabE'' [http://www.ncbi.nlm.nih.gov/sites/entrez/19047346 PubMed] | * '''Operon:''' ''yabE'' [http://www.ncbi.nlm.nih.gov/sites/entrez/19047346 PubMed] | ||
| − | * | + | * '''[[Sigma factor]]:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19047346 PubMed] |
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* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 09:31, 7 August 2012
- Description: similar to cell wall binding protein
| Gene name | yabE |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 47 kDa, 9.282 |
| Gene length, protein length | 1311 bp, 437 aa |
| Immediate neighbours | yabD, rnmV |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU00400
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: contains a SPS domain
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P37546
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yabE PubMed
- Regulation:
- Regulatory mechanism:
- Additional information: expression is negatively controlled by a cis-acting antisense RNA that is dependent on SigX and SigM PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
John Helmann, Cornell University, USA Homepage
Your additional remarks
References
Warawan Eiamphungporn, John D Helmann
Extracytoplasmic function sigma factors regulate expression of the Bacillus subtilis yabE gene via a cis-acting antisense RNA.
J Bacteriol: 2009, 191(3);1101-5
[PubMed:19047346]
[WorldCat.org]
[DOI]
(I p)
