Difference between revisions of "RefZ"

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=References=
 
=References=
  
<pubmed>14651647,14762014,12850135 12850135, </pubmed>
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<pubmed>14651647,14762014,12850135 12850135, 22730127 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 15:51, 6 July 2012

  • Description: unknown

Gene name yttP
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 24 kDa, 6.706
Gene length, protein length 621 bp, 207 aa
Immediate neighbours hisJ, ytsP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YttP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YttP expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

CcpA regulon, PhoP regulon, Spo0A regulon

The gene

Basic information

  • Locus tag: BSU29630

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yttP (according to DBTBS)
  • Sigma factor:
  • Regulation:
    • repressed by glucose (3.1-fold) (CcpA) PubMed
    • expressed under conditions that trigger sporulation (Spo0A) PubMed
    • expressed under conditions of phosphate limitation (PhoP) PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jennifer K Wagner-Herman, Remi Bernard, Roisin Dunne, Alexandre W Bisson-Filho, Krithika Kumar, Trang Nguyen, Lawrence Mulcahy, John Koullias, Frederico J Gueiros-Filho, David Z Rudner
RefZ facilitates the switch from medial to polar division during spore formation in Bacillus subtilis.
J Bacteriol: 2012, 194(17);4608-18
[PubMed:22730127] [WorldCat.org] [DOI] (I p)

Zoltán Prágai, Nicholas E E Allenby, Nicola O'Connor, Sarah Dubrac, Georges Rapoport, Tarek Msadek, Colin R Harwood
Transcriptional regulation of the phoPR operon in Bacillus subtilis.
J Bacteriol: 2004, 186(4);1182-90
[PubMed:14762014] [WorldCat.org] [DOI] (P p)

Virginie Molle, Masaya Fujita, Shane T Jensen, Patrick Eichenberger, José E González-Pastor, Jun S Liu, Richard Losick
The Spo0A regulon of Bacillus subtilis.
Mol Microbiol: 2003, 50(5);1683-701
[PubMed:14651647] [WorldCat.org] [DOI] (P p)

Hans-Matti Blencke, Georg Homuth, Holger Ludwig, Ulrike Mäder, Michael Hecker, Jörg Stülke
Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways.
Metab Eng: 2003, 5(2);133-49
[PubMed:12850135] [WorldCat.org] [DOI] (P p)