Difference between revisions of "SpsK"

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|colspan="2" | '''Genetic context''' <br/> [[Image:spsK_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=spsK_3883427_3884278_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:spsK_expression.png|500px]]
 
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Revision as of 11:37, 23 April 2012

  • Description: spore coat polysaccharide synthesis

Gene name spsK
Synonyms ipa-73d
Essential no
Product unknown
Function spore coat polysaccharide synthesis
MW, pI 31 kDa, 6.081
Gene length, protein length 849 bp, 283 aa
Immediate neighbours spsL, spsJ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SpsK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpsK expression.png
























Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigE regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU37820

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: dTDP-4-dehydrorhamnose reductase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3SC6 (dTDP-4-dehydrorhamnose reductase (rfbD) from Bacillus anthracis str. Ames in complex with NADP; 42% identity, 72% similarity)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References