Difference between revisions of "YxkC"

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* '''Operon:''' ''yxkC'' {{PubMed|10746760}}
 
* '''Operon:''' ''yxkC'' {{PubMed|10746760}}
  
* '''[[Sigma factor]]:''' [[SigD]] {{PubMed|15033535}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxkC_3989232_3989873_1 yxkC] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigD]] {{PubMed|15033535}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** [[TnrA]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12823818 PubMed]
 
** [[TnrA]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12823818 PubMed]
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 09:39, 17 April 2012

  • Description: unknown

Gene name yxkC
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 22 kDa, 9.292
Gene length, protein length 639 bp, 213 aa
Immediate neighbours yxkD, galE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YxkC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

SigD regulon, TnrA regulon

The gene

Basic information

  • Locus tag: BSU38850

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: secreted (according to Swiss-Prot), extracellular (signal peptide) PubMed, membrane PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References