Difference between revisions of "YxkO"
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* '''Operon:''' ''yxkO'' {{PubMed|10746760}} | * '''Operon:''' ''yxkO'' {{PubMed|10746760}} | ||
| − | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxkO_3972448_3973278_-1 yxkO] {{PubMed|22383849}} |
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| + | * '''Sigma factor:''' [[SigB]] [http://www.ncbi.nlm.nih.gov/pubmed/15805528 PubMed] | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 09:34, 17 April 2012
- Description: ADP/ATP-dependent NAD(P)H-hydrate dehydratase, general stress protein, survival of ethanol stress
| Gene name | yxkO |
| Synonyms | |
| Essential | no |
| Product | ADP/ATP-dependent NAD(P)H-hydrate dehydratase |
| Function | survival of ethanol stress |
| MW, pI | 29 kDa, 5.488 |
| Gene length, protein length | 828 bp, 276 aa |
| Immediate neighbours | yxlA, cydD |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38720
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 1KYH
- UniProt: P94368
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yxkO PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528]
[WorldCat.org]
[DOI]
(P p)
R-g Zhang, J Grembecka, E Vinokour, F Collart, I Dementieva, W Minor, A Joachimiak
Structure of Bacillus subtilis YXKO--a member of the UPF0031 family and a putative kinase.
J Struct Biol: 2002, 139(3);161-70
[PubMed:12457846]
[WorldCat.org]
[DOI]
(P p)
Ken-Ichi Yoshida, Izumi Ishio, Eishi Nagakawa, Yoshiyuki Yamamoto, Mami Yamamoto, Yasutaro Fujita
Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome.
Microbiology (Reading): 2000, 146 ( Pt 3);573-579
[PubMed:10746760]
[WorldCat.org]
[DOI]
(P p)
