Difference between revisions of "PsdA"

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(Extended information on the protein)
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** ''[[psdR]]-[[psdS]]-[[psdA]]-[[psdB]]'' {{PubMed|21078927}}  
 
** ''[[psdR]]-[[psdS]]-[[psdA]]-[[psdB]]'' {{PubMed|21078927}}  
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yvcR_3565496_3566275_-1 psdA] {{PubMed|22383849}}
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 +
* '''Sigma factor:'''  
 
** ''[[psdA]]'': [[SigA]] {{PubMed|21078927}}  
 
** ''[[psdA]]'': [[SigA]] {{PubMed|21078927}}  
 
** ''[[psdR]]'': [[SigA]] {{PubMed|21078927}}  
 
** ''[[psdR]]'': [[SigA]] {{PubMed|21078927}}  

Revision as of 07:12, 17 April 2012

  • Description: ABC transporter (ATP-binding protein) for the export of lipid II-binding lantibiotics, such as nisin and gallidermin

Gene name psdA
Synonyms yvcR
Essential no
Product ABC transporter (ATP-binding protein)
Function export of toxic peptides
Interactions involving this protein in SubtInteract: PsdA
MW, pI 28 kDa, 6.345
Gene length, protein length 777 bp, 259 aa
Immediate neighbours psdB, psdS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvcR context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

ABC transporters, resistance against toxins/ antibiotics, membrane proteins

This gene is a member of the following regulons

PsdR regulon

The gene

Basic information

  • Locus tag: BSU34700

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed