Difference between revisions of "YvgO"

From SubtiWiki
Jump to: navigation, search
(References)
Line 99: Line 99:
 
* '''Operon:''' ''yvgO'' (according to [http://dbtbs.hgc.jp/COG/prom/yvgO.html DBTBS])
 
* '''Operon:''' ''yvgO'' (according to [http://dbtbs.hgc.jp/COG/prom/yvgO.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigB]] {{PubMed|15805528}}  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yvgO_3427802_3428287_1 yvgO] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigB]] {{PubMed|15805528}}  
  
 
* '''Regulation:'''   
 
* '''Regulation:'''   

Revision as of 06:30, 17 April 2012

  • Description: general stress protein, survival of ethanol stress

Gene name yvgO
Synonyms
Essential no
Product unknown
Function survival of ethanol stress
MW, pI 17 kDa, 4.853
Gene length, protein length 483 bp, 161 aa
Immediate neighbours yvgN, nhaK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvgO context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

general stress proteins (controlled by SigB)

This gene is a member of the following regulons

AbrB regulon, SigB regulon

The gene

Basic information

  • Locus tag: BSU33410

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: extracellular (signal peptide) PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yvgO (according to DBTBS)
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed