Difference between revisions of "YngC"

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** ''[[yngC]]'' {{PubMed|18179421}}
 
** ''[[yngC]]'' {{PubMed|18179421}}
  
* '''[[Sigma factor]]:''' [[SigM]] [http://www.ncbi.nlm.nih.gov/sites/entrez/18179421 Pubmed]
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yngC_1947668_1948264_1 yngC] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigM]] [http://www.ncbi.nlm.nih.gov/sites/entrez/18179421 Pubmed]
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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**[[yngA]]: [[YclJ]]: transcription activation {{PubMed|20512483}}
 
**[[yngA]]: [[YclJ]]: transcription activation {{PubMed|20512483}}
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 09:57, 13 April 2012

  • Description: similar to alkaline phosphatase

Gene name yngC
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 21 kDa, 9.77
Gene length, protein length 594 bp, 198 aa
Immediate neighbours yngB, nrnB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YngC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

cell envelope stress proteins (controlled by SigM, V, W, X, Y), membrane proteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigM regulon, YclJ regulon

The gene

Basic information

  • Locus tag: BSU18190

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: dedA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Mitsuo Ogura, Kensuke Tsukahara, Teruo Tanaka
Identification of the sequences recognized by the Bacillus subtilis response regulator YclJ.
Arch Microbiol: 2010, 192(7);569-80
[PubMed:20512483] [WorldCat.org] [DOI] (I p)

Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421] [WorldCat.org] [DOI] (P p)