Difference between revisions of "YkrK"

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* '''Operon:'''  
 
* '''Operon:'''  
  
* '''[[Sigma factor]]:'''  
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ykrK_1414125_1414826_-1 ykrK] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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** might be subject to autoregulation {{PubMed|22447908}}
 
** might be subject to autoregulation {{PubMed|22447908}}
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 07:37, 13 April 2012

  • Description: transcription repressor of ykrL expression

Gene name ykrK
Synonyms
Essential no
Product transcription repressor of ykrL
Function regulation of membrane protein quality control
MW, pI 26 kDa, 6.153
Gene length, protein length 699 bp, 233 aa
Immediate neighbours sspD, ykrL
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkrK context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

Transcription factors and their control

This gene is a member of the following regulons

The YkrK regulon: ykrL

The gene

Basic information

  • Locus tag: BSU13480

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
    • might be subject to autoregulation PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Bogumila C Marciniak, Hein Trip, Fabrizia Fusetti, Oscar P Kuipers
Regulation of ykrL (htpX) by Rok and YkrK, a novel type of regulator in Bacillus subtilis.
J Bacteriol: 2012, 194(11);2837-45
[PubMed:22447908] [WorldCat.org] [DOI] (I p)