Difference between revisions of "YfhM"

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* '''Operon:''' ''[[yfhK]]-[[yfhL]]-[[yfhM]]'' {{PubMed|10913081}}
 
* '''Operon:''' ''[[yfhK]]-[[yfhL]]-[[yfhM]]'' {{PubMed|10913081}}
  
* '''[[Sigma factor]]:''' [[SigB]] {{PubMed|10913081,15805528}}, [[SigW]] {{PubMed|9987136}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yfhM_929725_930585_1 yfhM] {{PubMed|22383849}}
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* '''Sigma factor:''' [[SigB]] {{PubMed|10913081,15805528}}, [[SigW]] {{PubMed|9987136}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 16:28, 12 April 2012

  • Description: general stress protein, similar to epoxide hydrolase

Gene name yfhM
Synonyms
Essential no
Product unknown
Function survival of ethanol stress
MW, pI 32 kDa, 6.064
Gene length, protein length 858 bp, 286 aa
Immediate neighbours yfhL, csbB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfhM context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

general stress proteins (controlled by SigB), cell envelope stress proteins (controlled by SigM, V, W, X, Y), poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigB regulon, SigW regulon

The gene

Basic information

  • Locus tag: BSU08590

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: AB hydrolase superfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation PubMed

Expression and regulation

  • Regulatory mechanism:
  • Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

H Antelmann, C Scharf, M Hecker
Phosphate starvation-inducible proteins of Bacillus subtilis: proteomics and transcriptional analysis.
J Bacteriol: 2000, 182(16);4478-90
[PubMed:10913081] [WorldCat.org] [DOI] (P p)

X Huang, A Gaballa, M Cao, J D Helmann
Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W.
Mol Microbiol: 1999, 31(1);361-71
[PubMed:9987136] [WorldCat.org] [DOI] (P p)