Difference between revisions of "YfnE"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
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* '''Operon:''' ''[[yfnH]]-[[yfnG]]-[[yfnF]]-[[yfnE]]-[[yfnD]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfnHGFED.html DBTBS])
 
* '''Operon:''' ''[[yfnH]]-[[yfnG]]-[[yfnF]]-[[yfnE]]-[[yfnD]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfnHGFED.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15383836}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yfnE_801172_802350_1 yfnE] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigK]] {{PubMed|15383836}}
  
 
* '''Regulation:''' expressed during sporulation ([[SigK]]) {{PubMed|15383836}}
 
* '''Regulation:''' expressed during sporulation ([[SigK]]) {{PubMed|15383836}}
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 15:55, 12 April 2012

  • Description: unknown

Gene name yfnE
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 45 kDa, 5.964
Gene length, protein length 1176 bp, 392 aa
Immediate neighbours yfnF, yfnD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfnE context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU07300

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during sporulation (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836] [WorldCat.org] [DOI] (I p)