YbcM

• Description: similar to glucosamine-fructose-6-phosphate aminotransferase
  
  

Gene name	ybcM
Synonyms
Essential	no
Product	unknown
Function	unknown
MW, pI	11 kDa, 4.787
Gene length, protein length	312 bp, 104 aa
Immediate neighbours	ybcL, skfA
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

Categories containing this gene/protein

utilization of specific carbon sources, membrane proteins

The gene

Basic information

• Locus tag: BSU01900

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:
  • cell membrane (according to Swiss-Prot)

Database entries

• Structure:

• UniProt: O31421

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: ybcM PubMed

• Sigma factor:

• Regulation: induced by rhamnogalacturonan PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Akihito Ochiai, Takafumi Itoh, Akiko Kawamata, Wataru Hashimoto, Kousaku Murata
Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene clusters responsible for rhamnogalacturonan depolymerization.
Appl Environ Microbiol: 2007, 73(12);3803-13
[PubMed:17449691] [WorldCat.org] [DOI] (P p)