Difference between revisions of "Scr"
| Line 8: | Line 8: | ||
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Essential''' || | + | |style="background:#ABCDEF;" align="center"| '''Essential''' || yes |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || small cytoplasmic RNA (scRNA, 4.5S RNA), | |style="background:#ABCDEF;" align="center"| '''Product''' || small cytoplasmic RNA (scRNA, 4.5S RNA), | ||
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===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| − | + | * the gene is essential {{PubMed|7506707}} | |
=== Database entries === | === Database entries === | ||
| Line 107: | Line 107: | ||
=References= | =References= | ||
| − | <pubmed>9346318,2468993,17576666, </pubmed> | + | <pubmed>9346318,2468993,17576666, 1372600,7506707 1383945 7538759 10224127 9677377 8662730 10222262</pubmed> |
[[Category:small RNA]] | [[Category:small RNA]] | ||
Revision as of 15:40, 3 April 2012
- Description: 4.5 S RNA
| Gene name | scr |
| Synonyms | |
| Essential | yes |
| Product | small cytoplasmic RNA (scRNA, 4.5S RNA),
signal recognition particle-like (SRP) component |
| Function | presecretory protein translocation |
| Interactions involving this RNA in SubtInteract: Scr | |
| Immediate neighbours | yaaJ, dnaX |
| Gene sequence (+200bp) | Protein sequence |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
- the gene is essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
- Structure:
Additional information
The RNA
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
Extended information on the RNA
- Kinetic information
Database entries
- Structure:
Additional information
Expression and regulation
- Sigma factor: SigA (both promoters)
- Regulation:
- Regulatory mechanism:
- Additional information: transcribed as 354 nt precursor, cleaved at the 5' end by RNase III and at the 3' site by RNase J1 to yield a 275 nt molecule, final trimming to 271 nt sc RNA by RNase PH PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
Labs working on this gene/protein
David Bechhofer, Mount Sinai School, New York, USA Homepage
Your additional remarks
References
