Difference between revisions of "YcgA"

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* '''Locus tag:''' BSU03020
 
* '''Locus tag:''' BSU03020
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[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ycgA_325339_326772_1 Expression]
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===

Revision as of 13:21, 24 January 2012

  • Description: unknown

Gene name ycgA
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 41 kDa, 8.241
Gene length, protein length 1188 bp, 396 aa
Immediate neighbours amhX, ycgB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcgA context.gif
This image was kindly provided by SubtiList





Categories containing this gene/protein

membrane proteins, proteins of unknown function

This gene is a member of the following regulons

CodY regulon

The gene

Basic information

  • Locus tag: BSU03020

Expression

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

  • The: E.coli homolog: yfcC

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ycgA (according to DBTBS)
  • Regulation:
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Regulatory mechanism:
  • Additional information: the mRNA is very stable (half-life > 15 min) PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References