Difference between revisions of "LytF"
(→Extended information on the protein) |
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* '''Protein family:''' nlpC/p60 family (according to Swiss-Prot) | * '''Protein family:''' nlpC/p60 family (according to Swiss-Prot) | ||
| − | * '''Paralogous protein(s):''' | + | * '''Paralogous protein(s):''' the C-terminal D,L-endopeptidase domains of [[LytE]], [[LytF]], [[CwlS]], and [[CwlO]] exhibit strong sequence similarity |
=== Extended information on the protein === | === Extended information on the protein === | ||
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* '''Domains:''' | * '''Domains:''' | ||
| + | ** C-terminal D,L-endopeptidase domain {{PubMed|22139507}} | ||
* '''Modification:''' | * '''Modification:''' | ||
| Line 86: | Line 87: | ||
** [[IseA]]-[[LytF]] (catalytic domain) {{PubMed|18761696}} | ** [[IseA]]-[[LytF]] (catalytic domain) {{PubMed|18761696}} | ||
| − | * '''[[Localization]]:''' secreted (according to Swiss-Prot) | + | * '''[[Localization]]:''' |
| + | **secreted (according to Swiss-Prot) | ||
| + | ** localizes to cell septa and poles {{PubMed|22139507}} | ||
=== Database entries === | === Database entries === | ||
| Line 133: | Line 136: | ||
=References= | =References= | ||
| − | <pubmed> 20351052,10322020,10206711,14594841,18761696, 19542270 </pubmed> | + | <pubmed> 20351052,10322020,10206711,14594841,18761696, 19542270 22139507</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 11:59, 8 December 2011
- Description: gamma-D-glutamate-meso-diaminopimelate muropeptidase (major autolysin)
| Gene name | lytF |
| Synonyms | cwlE, yhdD |
| Essential | no |
| Product | gamma-D-glutamate-meso-diaminopimelate muropeptidase (major autolysin) |
| Function | cell separation |
| Interactions involving this protein in SubtInteract: LytF | |
| MW, pI | 51 kDa, 10.41 |
| Gene length, protein length | 1464 bp, 488 aa |
| Immediate neighbours | yhdC, nsrR |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
cell wall degradation/ turnover
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU09370
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: nlpC/p60 family (according to Swiss-Prot)
- Paralogous protein(s): the C-terminal D,L-endopeptidase domains of LytE, LytF, CwlS, and CwlO exhibit strong sequence similarity
Extended information on the protein
- Kinetic information:
- Domains:
- C-terminal D,L-endopeptidase domain PubMed
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- secreted (according to Swiss-Prot)
- localizes to cell septa and poles PubMed
Database entries
- Structure:
- UniProt: O07532
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
