Difference between revisions of "YwoC"
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | + | {{SubtiWiki regulon|[[YtrA regulon]]}} | |
=The gene= | =The gene= | ||
| Line 78: | Line 78: | ||
* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' | + | * '''[[SubtInteract|Interactions]]:''' |
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
=== Database entries === | === Database entries === | ||
| Line 96: | Line 96: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[ywoB]]-[[ywoC]]-[[ywoD]]'' {{PubMed|21856850}} |
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|21856850}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** induced by ramoplanin ([[YtrA]]) {{PubMed|21856850}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[YtrA]]: transcription repression {{PubMed|21856850}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 125: | Line 127: | ||
=References= | =References= | ||
| − | + | '''Additional publications:''' {{PubMed|21856850}} | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:21, 24 August 2011
- Description: unknown
| Gene name | ywoC |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 20 kDa, 4.621 |
| Gene length, protein length | 567 bp, 189 aa |
| Immediate neighbours | ywoD, ywoB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36490
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
- The E.coli homolog: yecD
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: isochorismatase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P94573
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
