Difference between revisions of "PutR"

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=== Basic information/ Evolution ===
 
=== Basic information/ Evolution ===
  
* '''Catalyzed reaction/ biological activity:'''  
+
* '''Catalyzed reaction/ biological activity:''' transcription activation of the proline utilization operon ''[[putB]]-[[putC]]-[[putP]]'' in the presence of proline  {{PubMed|21840319}}
  
 
* '''Protein family:''' cdaR family (according to Swiss-Prot)
 
* '''Protein family:''' cdaR family (according to Swiss-Prot)

Revision as of 16:03, 17 August 2011

  • Description: transcriptional activator of the proline utilization operon putB-putC-putP

Gene name ycgP
Synonyms
Essential no
Product transcriptional activator
Function regulation of proline utilization
MW, pI 47 kDa, 5.37
Gene length, protein length 1233 bp, 411 aa
Immediate neighbours putP, ycgQ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YcgP context.gif
This image was kindly provided by SubtiList





Categories containing this gene/protein

transcription factors and their control proteins of unknown function

This gene is a member of the following regulons

The PutR regulon:

The gene

Basic information

  • Locus tag: BSU03230

Phenotypes of a mutant

  • no growth with proline as single source of carbon or nitrogen PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: transcription activation of the proline utilization operon putB-putC-putP in the presence of proline PubMed
  • Protein family: cdaR family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s): proline acts as co-activator PubMed
  • Effectors of protein activity: proline activates PutR PubMed
  • Interactions:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: constitutively expressed PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References