Difference between revisions of "YlaD"

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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[sigma factor]] [[YlaC]]
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[sigma factor]] [[YlaC]]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YlaD YlaD]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 4.473   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 11 kDa, 4.473   

Revision as of 16:53, 30 July 2011

  • Description: anti-Sigma(YlaC)

Gene name ylaD
Synonyms
Essential no
Product anti-Sigma(YlaC)
Function control of sigma factor YlaC
Interactions involving this protein in SubtInteract: YlaD
MW, pI 11 kDa, 4.473
Gene length, protein length 291 bp, 97 aa
Immediate neighbours ylaC, ylaE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YlaD context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sigma factors and their control, membrane proteins

This gene is a member of the following regulons

Spx regulon, YlaC regulon

The gene

Basic information

  • Locus tag: BSU14740

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Han-Bong Ryu, Inji Shin, Hyung-Soon Yim, Sa-Ouk Kang
YlaC is an extracytoplasmic function (ECF) sigma factor contributing to hydrogen peroxide resistance in Bacillus subtilis.
J Microbiol: 2006, 44(2);206-16
[PubMed:16728958] [WorldCat.org] (P p)

Takashi Matsumoto, Kaoru Nakanishi, Kei Asai, Yoshito Sadaie
Transcriptional analysis of the ylaABCD operon of Bacillus subtilis encoding a sigma factor of extracytoplasmic function family.
Genes Genet Syst: 2005, 80(6);385-93
[PubMed:16501307] [WorldCat.org] [DOI] (P p)