Difference between revisions of "GerPA"

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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Additional information:'''
 
* '''Additional information:'''
 +
** A [[ncRNA]] is predicted between ''[[gerPA]]'' and ''[[yisI]]'' {{PubMed|20525796}}
  
 
=Biological materials =
 
=Biological materials =
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=References=
 
=References=
  
<pubmed>10715007,, </pubmed>
+
<pubmed>10715007,20525796, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:14, 4 May 2011

  • Description: spore germination protein

Gene name gerPA
Synonyms yisH
Essential no
Product unknown
Function germination
MW, pI 7 kDa, 4.464
Gene length, protein length 219 bp, 73 aa
Immediate neighbours gerPB, yisI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
GerPA context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

germination

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU10720

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: gerPA/gerPF family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigK) PubMed
    • subject to negative regulation by GerE PubMed
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References