Difference between revisions of "RplT"

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{{SubtiWiki regulon|[[RplT regulon]]}},
 
{{SubtiWiki regulon|[[RplT regulon]]}},
 
{{SubtiWiki regulon|[[stringent response]]}}
 
{{SubtiWiki regulon|[[stringent response]]}}
 
+
=The [[RplT regulon]]: ''[[infC]]-[[rpmI]]-[[rplT]]-[[ysdA]]''=
 
=The gene=
 
=The gene=
  

Revision as of 12:05, 5 February 2011

Gene name rplT
Synonyms
Essential yes PubMed
Product ribosomal protein L20
Function translation
MW, pI 13 kDa, 11.901
Gene length, protein length 357 bp, 119 aa
Immediate neighbours ysdA, rpmI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
RplT context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

translation, RNA binding regulators, essential genes, membrane proteins

This gene is a member of the following regulons

RplT regulon, stringent response

The RplT regulon: infC-rpmI-rplT-ysdA

The gene

Basic information

  • Locus tag: BSU28850

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
    • binding of RplT to a RNA site in the infC leader region causes transcription termination PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References