Difference between revisions of "YvdF"
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=Expression and regulation= | =Expression and regulation= | ||
| − | + | * '''Operon:''' ''[[yvdE]]-[[yvdF]]-[[mdxE]]-[[mdxF]]-[[mdxG]]-[[yvdJ]]-[[yvdK]]-[[malL]]-[[pgcM]]'' {{PubMed|16707683}} | |
| − | * '''Operon:''' | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 08:44, 8 August 2010
- Description: glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase
| Gene name | yvdF |
| Synonyms | |
| Essential | no |
| Product | glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase |
| Function | starch and maltodextrin utilization |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 68 kDa, 5.178 |
| Gene length, protein length | 1767 bp, 589 aa |
| Immediate neighbours | mdxE, yvdE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU34620
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: BbmA subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot), on both sides of the cytoplasmic membrane and in the periplasm during vegetative growth but in the cytoplasm of prespores PubMed
Database entries
- Structure: 1J0J (from G. stearothermophilus, 56% identity, complex with maltotetraose), 1J0H (from G. stearothermophilus, 56% identity)
- UniProt: O06988
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
