Difference between revisions of "BsaA"

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[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 18:25, 2 August 2010

  • Description: similar to glutathione peroxidase

Gene name bsaA
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 18 kDa, 5.251
Gene length, protein length 480 bp, 160 aa
Immediate neighbours ypgQ, metA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
BsaA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU21900

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

The gene is annotated in KEGG as glutathione peroxidase EC 1.11.1.9. It is marked in Swiss-Prot as “glutathione peroxidase homolog” and in MetaCyc as “glutathione peroxidase”. Several studies suggested that glutathione is probably absent in B. subtilis. PubMed

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Tzu-Lin Hsiao, Olga Revelles, Lifeng Chen, Uwe Sauer, Dennis Vitkup
Automatic policing of biochemical annotations using genomic correlations.
Nat Chem Biol: 2010, 6(1);34-40
[PubMed:19935659] [WorldCat.org] [DOI] (I p)

V Capuano, N Galleron, P Pujic, A Sorokin, S D Ehrlich
Organization of the Bacillus subtilis 168 chromosome between kdg and the attachment site of the SP beta prophage: use of Long Accurate PCR and yeast artificial chromosomes for sequencing.
Microbiology (Reading): 1996, 142 ( Pt 11);3005-15
[PubMed:8969496] [WorldCat.org] [DOI] (P p)