Difference between revisions of "FbpA"
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| − | * '''Description:''' Fur-regulated basic protein, acts as RNA chaperone for fsrA <br/><br/> | + | * '''Description:''' Fur-regulated basic protein, acts as RNA chaperone for ''[[fsrA]]'' <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || Fur-regulated basic protein, <br/>acts as RNA chaperone for fsrA | + | |style="background:#ABCDEF;" align="center"| '''Product''' || Fur-regulated basic protein, <br/>acts as RNA chaperone for ''[[fsrA]]'' |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || RNA chaperone | |style="background:#ABCDEF;" align="center"|'''Function''' || RNA chaperone | ||
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | + | * '''Operon:''' ''[[fbpA]]-[[fbpB]]'' {{PubMed|18697947}} | |
| − | * '''Operon:''' | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** induced upon iron starvation ([[Fur]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/12354229 PubMed] | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[Fur]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12354229 PubMed] | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 119: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed> | + | <pubmed>18697947, </pubmed> |
[[Category:short peptide]] | [[Category:short peptide]] | ||
Revision as of 20:28, 1 May 2010
- Description: Fur-regulated basic protein, acts as RNA chaperone for fsrA
| Gene name | fbpA |
| Synonyms | ydbN |
| Essential | no |
| Product | Fur-regulated basic protein, acts as RNA chaperone for fsrA |
| Function | RNA chaperone |
| MW, pI | xx,x kDa, 9.50 |
| Gene length, protein length | 159 bp, 53 amino acids |
| Immediate neighbours | fbpB, ydbO |
| Gene sequence (+200bp) | Protein sequence |
Genetic context 
| |
Contents
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The sequence of the former ydbN gene was corrected, and does now contain two genes, fbpA and fbpB. PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry: no entry
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Ahmed Gaballa, Haike Antelmann, Claudio Aguilar, Sukhjit K Khakh, Kyung-Bok Song, Gregory T Smaldone, John D Helmann
The Bacillus subtilis iron-sparing response is mediated by a Fur-regulated small RNA and three small, basic proteins.
Proc Natl Acad Sci U S A: 2008, 105(33);11927-32
[PubMed:18697947]
[WorldCat.org]
[DOI]
(I p)
