Difference between revisions of "WalR"

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(Genes controlled by WalR {{PubMed|17581128}})
(Original Publications)
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==Original Publications==
 
==Original Publications==
<pubmed>18573169,17350627,10094672,17827301,9829949,17581128,10878122,16030236,12950927, 19574649, 20059685 20111065 </pubmed>
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<pubmed>18573169,17350627,10094672,17827301,9829949,17581128,10878122,16030236,12950927, 19574649, 20059685 20111065 20167622 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:28, 20 February 2010

  • Description: two-component response regulator, controls cell wall metabolism

Gene name walR
Synonyms yycF
Essential yes PubMed
Product two-component response regulator
Function control of cell wall metabolism
MW, pI 27 kDa, 4.876
Gene length, protein length 705 bp, 235 aa
Immediate neighbours walK, trnY-Phe
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YycF context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU40410

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: OmpR family of two-component transcription regulators
  • Paralogous protein(s):

Genes controlled by WalR PubMed

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated by WalK on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity: phosphorylation likely affects DNA-binding activity
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure: 2D1V (DNA binding domain), 2ZWM (receiver domain)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during vegetative growth, repressed during stationary phase PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews


Original Publications