Difference between revisions of "YxlD"

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* '''Description:''' negative regulation of SigY-directed transcription of the ''[[sigY]]'' operon<br/><br/>
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* '''Description:''' negative regulation of [[SigY]]-directed transcription of the ''[[sigY]]'' operon<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
 
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || negative regulation of SigY-directed transcription of the ''[[sigY]]'' operon
+
|style="background:#ABCDEF;" align="center"|'''Function''' || negative regulation of [[SigY]]-directed transcription of the ''[[sigY]]'' operon
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 10.271   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 10.271   
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=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[sigY]]-[[yxlC]]-[[yxlD]]-[[yxlE]]-[[yxlF]]-[[yxlG]]'' {{PubMed|14769884}}
  
* '''Operon:'''
+
* '''[[Sigma factor]]:''' [[SigY]] {{PubMed|12897008}}
 
 
* '''[[[[Sigma factor]]]]:'''  
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 10:39, 6 February 2010

  • Description: negative regulation of SigY-directed transcription of the sigY operon

Gene name yxlD
Synonyms
Essential no
Product unknown
Function negative regulation of SigY-directed transcription of the sigY operon
MW, pI 7 kDa, 10.271
Gene length, protein length 204 bp, 68 aa
Immediate neighbours yxlE, yxlC
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YxlD context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU38680

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Shigeo Tojo, Masayuki Matsunaga, Takashi Matsumoto, Choong-Min Kang, Hirotake Yamaguchi, Kei Asai, Yoshito Sadaie, Ken-ichi Yoshida, Yasutaro Fujita
Organization and expression of the Bacillus subtilis sigY operon.
J Biochem: 2003, 134(6);935-46
[PubMed:14769884] [WorldCat.org] [DOI] (P p)

Min Cao, Letal Salzberg, Ching Sung Tsai, Thorsten Mascher, Carla Bonilla, Tao Wang, Rick W Ye, Leticia Márquez-Magaña, John D Helmann
Regulation of the Bacillus subtilis extracytoplasmic function protein sigma(Y) and its target promoters.
J Bacteriol: 2003, 185(16);4883-90
[PubMed:12897008] [WorldCat.org] [DOI] (P p)