Difference between revisions of "GanB"
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=Expression and regulation= | =Expression and regulation= | ||
| − | + | * '''Operon:''' ''[[yvfK]]-[[yvfL]]-[[yvfM]]-[[lacA]]-[[yvfO]]'' {{PubMed|9287030}} | |
| − | * '''Operon:''' | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| Line 95: | Line 94: | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[LacR]]: transcription repression {{PubMed|9287030}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
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=References= | =References= | ||
| − | <pubmed>17056685 </pubmed> | + | <pubmed>17056685 9287030 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 11:12, 29 December 2009
- Description: arabinogalactan endo-1,4-beta-galactosidase
| Gene name | yvfO |
| Synonyms | |
| Essential | no |
| Product | arabinogalactan endo-1,4-beta-galactosidase |
| Function | galactan utilization |
| MW, pI | 47 kDa, 8.243 |
| Gene length, protein length | 1287 bp, 429 aa |
| Immediate neighbours | rsbP, lacA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU34120
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endohydrolysis of (1->4)-beta-D-galactosidic linkages in arabinogalactans (according to Swiss-Prot)
- Protein family: glycosyl hydrolase 53 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 2J74 (B. licheniformis)
- UniProt: O07013
- KEGG entry: [3]
- E.C. number: 3.2.1.89
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
