Difference between revisions of "SdpI"

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(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
 
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* '''Operon:''' ''[[sdpR]]-[[sdpI]]'' {{PubMed|12817086}}
* '''Operon:'''  
+
 
+
* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|16469701}}
* '''[[Sigma factor]]:'''  
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
** repressed during logrithmic growth ([[AbrB]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/16469701 PubMed]
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** repressed during logrithmic growth ([[AbrB]]) {{PubMed|16469701}}
 +
** induced by extracellular [[SdpC]] ([[SdpR]]) {{PubMed|16469701}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
** [[AbrB]]:  transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16469701 PubMed]
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** [[AbrB]]:  transcription repression {{PubMed|16469701}}
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** [[SdpR]]: transcription repression {{PubMed|16469701}}
  
* '''Additional information:'''  
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* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 10:46, 29 December 2009

  • Description: immunity protein, protection against SdpC

Gene name sdpI
Synonyms yvaZ
Essential no
Product immunity protein
Function protection against SdpC
MW, pI 23 kDa, 9.61
Gene length, protein length 621 bp, 207 aa
Immediate neighbours sdpC, sdpR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvaZ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU33780

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YfhL

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References