Difference between revisions of "Metabolism"
(→Models of metabolism) |
|||
| Line 8: | Line 8: | ||
==Metabolic flux analyses== | ==Metabolic flux analyses== | ||
<pubmed>19917605 </pubmed> | <pubmed>19917605 </pubmed> | ||
| + | |||
| + | ==Minimal genome projects== | ||
| + | <pubmed>19943949 </pubmed> | ||
==Reviews== | ==Reviews== | ||
Revision as of 11:31, 12 December 2009
B. subtilis is a chemoheterotrophic organism. It uses glucose and ammonium/glutamine as preferred sources of carbon and nitrogen, respectively. The bacteria can grow on a minimal medium. It produces all cofactors.
A suite of models of B. subtilis metabolism can by found in SubtiPathways.
Contents
Models of metabolism
Metabolic flux analyses
Roelco J Kleijn, Joerg M Buescher, Ludovic Le Chat, Matthieu Jules, Stephane Aymerich, Uwe Sauer
Metabolic fluxes during strong carbon catabolite repression by malate in Bacillus subtilis.
J Biol Chem: 2010, 285(3);1587-96
[PubMed:19917605]
[WorldCat.org]
[DOI]
(I p)
Minimal genome projects
Reviews
Relevant papers on other organisms
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley M Deacon, John Wooley, Scott A Lesley, Ian A Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik
Three-dimensional structural view of the central metabolic network of Thermotoga maritima.
Science: 2009, 325(5947);1544-9
[PubMed:19762644]
[WorldCat.org]
[DOI]
(I p)
Jie Yuan, Christopher D Doucette, William U Fowler, Xiao-Jiang Feng, Matthew Piazza, Herschel A Rabitz, Ned S Wingreen, Joshua D Rabinowitz
Metabolomics-driven quantitative analysis of ammonia assimilation in E. coli.
Mol Syst Biol: 2009, 5;302
[PubMed:19690571]
[WorldCat.org]
[DOI]
(I p)
Bryson D Bennett, Elizabeth H Kimball, Melissa Gao, Robin Osterhout, Stephen J Van Dien, Joshua D Rabinowitz
Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli.
Nat Chem Biol: 2009, 5(8);593-9
[PubMed:19561621]
[WorldCat.org]
[DOI]
(I p)