Difference between revisions of "YcbJ"
| Line 92: | Line 92: | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| − | * '''Regulation:''' induced by D-glucarate/galactarate ([[YcbG]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/12044674 PubMed] | + | * '''Regulation:''' |
| + | ** induced by D-glucarate/galactarate ([[YcbG]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/12044674 PubMed] | ||
| + | ** repressed during logarithmic phase ([[AbrB]]) {{PubMed|18840696}} | ||
| − | * '''Regulatory mechanism:''' [[YcbG]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12044674 PubMed] | + | * '''Regulatory mechanism:''' |
| + | ** [[YcbG]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12044674 PubMed] | ||
| + | ** AbrB: transcription repression {{PubMed|18840696}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 118: | Line 122: | ||
=References= | =References= | ||
| − | <pubmed>12044674,, </pubmed> | + | <pubmed>12044674,18840696, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 22:24, 11 December 2009
- Description: similar to macrolide 2'-phosphotransferase
| Gene name | ycbJ |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 34 kDa, 4.565 |
| Gene length, protein length | 918 bp, 306 aa |
| Immediate neighbours | ycbH, rtpA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU02520
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: aminoglycoside phosphotransferase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P42242
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
