Difference between revisions of "DppD"
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| − | * '''Description:''' dipeptide ABC transporter (ATP-binding protein) <br/><br/> | + | * '''Description:''' dipeptide [[ABC transporter]] (ATP-binding protein) <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || dipeptide ABC transporter (ATP-binding protein) | + | |style="background:#ABCDEF;" align="center"| '''Product''' || dipeptide [[ABC transporter]] (ATP-binding protein) |
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of dipeptides | |style="background:#ABCDEF;" align="center"|'''Function''' || uptake of dipeptides | ||
| Line 54: | Line 54: | ||
* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| − | * '''Protein family:''' ABC transporter family (according to Swiss-Prot) | + | * '''Protein family:''' [[ABC transporter]] family (according to Swiss-Prot) |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| Line 62: | Line 62: | ||
* '''Kinetic information:''' | * '''Kinetic information:''' | ||
| − | * '''Domains:''' ABC transporter domain (according to Swiss-Prot) | + | * '''Domains:''' [[ABC transporter]] domain (according to Swiss-Prot) |
* '''Modification:''' | * '''Modification:''' | ||
Revision as of 20:22, 2 December 2009
- Description: dipeptide ABC transporter (ATP-binding protein)
| Gene name | dppD |
| Synonyms | dciAD |
| Essential | no |
| Product | dipeptide ABC transporter (ATP-binding protein) |
| Function | uptake of dipeptides |
| MW, pI | 36 kDa, 7.516 |
| Gene length, protein length | 1005 bp, 335 aa |
| Immediate neighbours | dppC, dppE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU12950
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ABC transporter family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains: ABC transporter domain (according to Swiss-Prot)
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P26905
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Virginie Molle, Yoshiko Nakaura, Robert P Shivers, Hirotake Yamaguchi, Richard Losick, Yasutaro Fujita, Abraham L Sonenshein
Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis.
J Bacteriol: 2003, 185(6);1911-22
[PubMed:12618455]
[WorldCat.org]
[DOI]
(P p)
Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453]
[WorldCat.org]
[DOI]
(P p)
F J Slack, P Serror, E Joyce, A L Sonenshein
A gene required for nutritional repression of the Bacillus subtilis dipeptide permease operon.
Mol Microbiol: 1995, 15(4);689-702
[PubMed:7783641]
[WorldCat.org]
[DOI]
(P p)
F J Slack, J P Mueller, M A Strauch, C Mathiopoulos, A L Sonenshein
Transcriptional regulation of a Bacillus subtilis dipeptide transport operon.
Mol Microbiol: 1991, 5(8);1915-25
[PubMed:1766371]
[WorldCat.org]
[DOI]
(P p)
