Difference between revisions of "YtrE"

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* '''Description:''' acetoin ABC transporter  (ATP-binding protein) <br/><br/>
+
* '''Description:''' acetoin [[ABC transporter]] (ATP-binding protein) <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || acetoin ABC transporter  (ATP-binding protein)  
+
|style="background:#ABCDEF;" align="center"| '''Product''' || acetoin [[ABC transporter]] (ATP-binding protein)  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of acetoin
 
|style="background:#ABCDEF;" align="center"|'''Function''' || uptake of acetoin
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:''' ABC transporter family (according to Swiss-Prot)
+
* '''Protein family:''' [[ABC transporter]] family (according to Swiss-Prot)
  
 
* '''Paralogous protein(s):'''
 
* '''Paralogous protein(s):'''
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=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[ytrA]]-[[ytrB]]-[[ytrC]]-[[ytrD]]-[[ytrE]]-[[ytrF]]''  {{PubMed|10986249}}
  
* '''Operon:'''
+
* '''[[Sigma factor]]:''' [[SigA]]  {{PubMed|10986249}}
 
 
* '''[[Sigma factor]]:'''  
 
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** expressed early in the stationary phase  {{PubMed|10986249}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 +
** [[YtrA]]: transcription repression {{PubMed|10986249}}
  
 
* '''Additional information:'''  
 
* '''Additional information:'''  

Revision as of 18:51, 27 November 2009

Gene name ytrE
Synonyms
Essential no
Product acetoin ABC transporter (ATP-binding protein)
Function uptake of acetoin
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 25 kDa, 5.98
Gene length, protein length 693 bp, 231 aa
Immediate neighbours ytrF, ytrD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtrE context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU30420

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early in the stationary phase PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References