Difference between revisions of "YqjM"

From SubtiWiki
Jump to: navigation, search
(Expression and regulation)
Line 89: Line 89:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''yqjM'' (according to [http://dbtbs.hgc.jp/COG/prom/yqjM.html DBTBS])
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
Line 97: Line 97:
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 20:31, 18 November 2009

  • Description: NADPH-dependent flavin oxidoreductase

Gene name yqjM
Synonyms
Essential no
Product NADPH-dependent flavin oxidoreductase
Function reduction of double bonds of nonsaturated aldehydes and

ketones, may be involved in detoxification

MW, pI 37 kDa, 5.137
Gene length, protein length 1014 bp, 338 aa
Immediate neighbours yqjN, yqjL
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YqjM context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU23820

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: NADPH + acceptor = NADP+ + reduced acceptor (according to Swiss-Prot)
  • Protein family: NamA subfamily (according to Swiss-Prot)
  • Paralogous protein(s): YqiG

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 1Z41 (oxidized form), 1Z48 (reduced form)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yqjM (according to DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References