Difference between revisions of "SpmA"

From SubtiWiki
Jump to: navigation, search
Line 88: Line 88:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[dacB]]-[[spmA]]-[[spmB]]''
+
* '''Operon:''' ''[[dacB]]-[[spmA]]-[[spmB]]'' {{PubMed|7642500}}
  
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}}
+
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,7528199}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|15699190,7528199}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
Line 117: Line 118:
  
 
=References=
 
=References=
 
+
<pubmed>7642500 7528199 15699190 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 17:59, 6 November 2009

  • Description: spore maturation protein (spore core dehydratation)

Gene name spmA
Synonyms ypuJ
Essential no
Product spore maturation protein (spore core dehydratation)
Function germination
MW, pI 21 kDa, 10.031
Gene length, protein length 588 bp, 196 aa
Immediate neighbours spmB, dacB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SpmA context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU23180

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References