Difference between revisions of "XynA"
| Line 90: | Line 90: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''xynA'' {{PubMed|8628241}} |
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|8628241}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| + | **constitutively expressed {{PubMed|8628241}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
Revision as of 19:19, 21 October 2009
- Description: endo-1,4-beta-xylanase
| Gene name | xynA |
| Synonyms | |
| Essential | no |
| Product | endo-1,4-beta-xylanase |
| Function | xylan degradation |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 23 kDa, 9.644 |
| Gene length, protein length | 639 bp, 213 aa |
| Immediate neighbours | pps, yobD |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU18840
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans (according to Swiss-Prot)
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: extracellular (signal peptide) PubMed
Database entries
- UniProt: P18429
- KEGG entry: [3]
- E.C. number: 3.2.1.8
Additional information
Expression and regulation
- Operon: xynA PubMed
- Regulation:
- constitutively expressed PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
