Difference between revisions of "YoaJ"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''yoaJ'' {{PubMed|12354229}} |
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** | + | ** induced upon iron starvation ([[Fur]]) {{PubMed|12354229}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | ** [[Fur]]: transcription repression | + | ** [[Fur]]: transcription repression {{PubMed|12354229}} |
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 19:05, 21 October 2009
- Description: bacterial expansin, required for the colonization of maize roots
| Gene name | yoaJ |
| Synonyms | |
| Essential | no |
| Product | expansin |
| Function | interaction with plant roots |
| MW, pI | 25 kDa, 9.447 |
| Gene length, protein length | 696 bp, 232 aa |
| Immediate neighbours | yoaI, yoaK |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU18630
Phenotypes of a mutant
strongly reduced ability to colonize maize roots PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: expansin PubMed
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: extracellular PubMed
Database entries
- UniProt: O34918
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yoaJ PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
