Difference between revisions of "YoxB"

From SubtiWiki
Jump to: navigation, search
Line 88: Line 88:
 
=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[yoxC]]-[[yoxB]]-[[yoaA]]'' {{PubMed|10482513}}
  
* '''[[[[[[Sigma factor]]]]]]:'''  
+
* '''[[Sigma factor]]:''' [[SigB]] {{PubMed|10482513,15805528}}
  
* '''Regulation:'''  
+
* '''Regulation:'''
 +
** induced by stress ([[SigB]]) {{PubMed|10482513,15805528}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
Line 117: Line 118:
  
 
=References=
 
=References=
 
+
<pubmed> 10482513,15805528</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 18:53, 21 October 2009

  • Description: general stress protein

Gene name yoxB
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 28 kDa, 8.665
Gene length, protein length 768 bp, 256 aa
Immediate neighbours yoxC, yoaA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YoxB context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU18520

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

A Petersohn, J Bernhardt, U Gerth, D Höper, T Koburger, U Völker, M Hecker
Identification of sigma(B)-dependent genes in Bacillus subtilis using a promoter consensus-directed search and oligonucleotide hybridization.
J Bacteriol: 1999, 181(18);5718-24
[PubMed:10482513] [WorldCat.org] [DOI] (P p)