Difference between revisions of "XtmB"

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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || PBSX terminase (large subunit))
+
|style="background:#ABCDEF;" align="center"| '''Product''' || PBSX terminase (large subunit)
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || phage DNA replication  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || phage DNA replication  
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=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[xtmA]]-[[xtmB]]-[[xkdE]]-[[xkdF]]-[[xkdG]]-[[xkdH]]-[[xkdI]]-[[xkdJ]]-[[xkdK]]-[[xkdM]]'' {{PubMed|2110147}}
  
* '''Operon:'''
+
* '''[[Sigma factor]]:''' [[Xpf]] {{PubMed|8083174}}
 
+
* '''[[Sigma factor]]:'''  
 
 
 
 
* '''Regulation:'''  
 
* '''Regulation:'''  
  
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=References=
 
=References=
 
+
<pubmed>2110147 8083174  </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:23, 30 September 2009

  • Description: PBSX terminase (large subunit)

Gene name xtmB
Synonyms ykxG
Essential no
Product PBSX terminase (large subunit)
Function phage DNA replication
MW, pI 50 kDa, 8.872
Gene length, protein length 1299 bp, 433 aa
Immediate neighbours xtmA, xkdE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
XtmB context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU12580

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

G E McDonnell, H Wood, K M Devine, D J McConnell
Genetic control of bacterial suicide: regulation of the induction of PBSX in Bacillus subtilis.
J Bacteriol: 1994, 176(18);5820-30
[PubMed:8083174] [WorldCat.org] [DOI] (P p)

H E Wood, M T Dawson, K M Devine, D J McConnell
Characterization of PBSX, a defective prophage of Bacillus subtilis.
J Bacteriol: 1990, 172(5);2667-74
[PubMed:2110147] [WorldCat.org] [DOI] (P p)