Difference between revisions of "CotO"
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''cotO'' (according to [http://dbtbs.hgc.jp/COG/prom/yjbX.html DBTBS]) |
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} | ||
| − | * '''Regulation:''' repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | + | * '''Regulation:''' |
| + | ** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | ||
| + | ** expressed during sporulation in the mother cell {{PubMed|15699190}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 118: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed>12107147, 16321932 </pubmed> | + | <pubmed>12107147,15699190 16321932 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 18:26, 29 September 2009
- Description: unknown
| Gene name | cotO |
| Synonyms | yjbX |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 25 kDa, 6.376 |
| Gene length, protein length | 681 bp, 227 aa |
| Immediate neighbours | fabI, cotZ |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU11730
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: spore wall (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O31622
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: cotO (according to DBTBS)
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
D C McPherson, H Kim, M Hahn, R Wang, P Grabowski, P Eichenberger, A Driks
Characterization of the Bacillus subtilis spore morphogenetic coat protein CotO.
J Bacteriol: 2005, 187(24);8278-90
[PubMed:16321932]
[WorldCat.org]
[DOI]
(P p)
Leif Steil, Mónica Serrano, Adriano O Henriques, Uwe Völker
Genome-wide analysis of temporally regulated and compartment-specific gene expression in sporulating cells of Bacillus subtilis.
Microbiology (Reading): 2005, 151(Pt 2);399-420
[PubMed:15699190]
[WorldCat.org]
[DOI]
(P p)
Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147]
[WorldCat.org]
[DOI]
(P p)
