Difference between revisions of "CotO"

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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''cotO'' (according to [http://dbtbs.hgc.jp/COG/prom/yjbX.html DBTBS])
  
 
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}}
 
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}}
  
* '''Regulation:''' repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed]   
+
* '''Regulation:'''  
 +
** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed]   
 +
** expressed during sporulation in the mother cell {{PubMed|15699190}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
Line 118: Line 120:
 
=References=
 
=References=
  
<pubmed>12107147, 16321932 </pubmed>
+
<pubmed>12107147,15699190 16321932 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 18:26, 29 September 2009

  • Description: unknown

Gene name cotO
Synonyms yjbX
Essential no
Product unknown
Function unknown
MW, pI 25 kDa, 6.376
Gene length, protein length 681 bp, 227 aa
Immediate neighbours fabI, cotZ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YjbX context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU11730

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: spore wall (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: cotO (according to DBTBS)
  • Regulation:
    • repressed by casamino acids PubMed
    • expressed during sporulation in the mother cell PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References