Difference between revisions of "RnhC"
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* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2D0B 2D0B] (complex with Mg2+, Geobacillus stearothermophilus , 47% identity), [http://www.rcsb.org/pdb/explore.do?structureId=2D0A 2D0A] (Geobacillus stearothermophilus, 47% identity) | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2D0B 2D0B] (complex with Mg2+, Geobacillus stearothermophilus , 47% identity), [http://www.rcsb.org/pdb/explore.do?structureId=2D0A 2D0A] (Geobacillus stearothermophilus, 47% identity) | ||
| − | * ''' | + | * '''UniProt:''' [http://www.uniprot.org/uniprot/P94541 P94541] |
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU28620] | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU28620] | ||
Revision as of 14:00, 20 July 2009
- Description: RNase HIII, endoribonuclease
| Gene name | rnhC |
| Synonyms | ysgB |
| Essential | no |
| Product | Mg2+-dependent RNase HIII |
| Function | endonucleolytic cleavage of RNA in RNA-DNA hybrid molecules |
| MW, pI | 33 kDa, 10.07 |
| Gene length, protein length | 939 bp, 313 aa |
| Immediate neighbours | yshA, pheT |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU28620
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endonucleolytic cleavage to 5'-phosphomonoester (according to Swiss-Prot)
- Protein family: RnhC subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 2D0B (complex with Mg2+, Geobacillus stearothermophilus , 47% identity), 2D0A (Geobacillus stearothermophilus, 47% identity)
- UniProt: P94541
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
