YtzF - Revision history

Sroppel: Replaced content with ''''This gene had been annotated by [http://www.ncbi.nlm.nih.gov/sites/entrez/9384377 Kunst et al.] (1997) but was deleted according to [http://www.ncbi.nlm.nih.gov/sites/entr...'

2009-06-09T18:31:48Z

Replaced content with ''''This gene had been annotated by [http://www.ncbi.nlm.nih.gov/sites/entrez/9384377 Kunst et al.] (1997) but was deleted according to [http://www.ncbi.nlm.nih.gov/sites/entr...'

Sroppel at 13:13, 3 June 2009

2009-06-03T13:13:58Z

Sroppel at 23:00, 2 June 2009

2009-06-02T23:00:12Z

Sroppel at 12:33, 24 May 2009

2009-05-24T12:33:36Z

Sroppel at 13:21, 21 May 2009

2009-05-21T13:21:48Z

Sroppel at 03:39, 14 May 2009

2009-05-14T03:39:44Z

Sroppel at 09:17, 5 May 2009

2009-05-05T09:17:02Z

Jstuelk: /* Basic information/ Evolution */

2009-04-26T13:25:42Z

‎Basic information/ Evolution

CLammers at 10:29, 8 April 2009

2009-04-08T10:29:04Z

Sroppel at 17:32, 23 March 2009

2009-03-23T17:32:56Z

← Older revision		Revision as of 18:31, 9 June 2009
Line 1:		Line 1:
−	* '''~~Description:''' similar to 16S pseudouridylate synthase <br/><br/>~~	+	'''This gene had been annotated by [http://www.ncbi.nlm.nih.gov/sites/entrez/9384377 Kunst et al.] (1997) but was deleted according to [http://www.ncbi.nlm.nih.gov/sites/entrez/19383706 Barbe et al.] (2009)'''
−
−	~~{\| align="right" border="1" cellpadding="2"~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\|'''Gene name'''~~
−	~~\|''ytzF''~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Synonyms''' \|\| '' ''~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Essential''' \|\| no~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Product''' \|\| unknown~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\|'''Function''' \|\| unknown~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''MW, pI''' \|\| 17 kDa, 5.474~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Gene length, protein length''' \|\| 471 bp, 157 aa~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\|'''Immediate neighbours''' \|\| ''[[ytzE]]'', ''[[ytzG]]''~~
−	\|-
−	~~\|style="background:#FAF8CC;" align="center"\|'''[http://subtiwiki.uni-goettingen.de/ytzF_nucleotide.txt Gene sequence (+200bp) ]'''~~
−	~~\|style="background:#FAF8CC;" align="center"\|'''[http://subtiwiki.uni-goettingen.de/ytzF_protein.txt Protein sequence]'''~~
−	\|-
−	~~\|colspan="2" \| '''Genetic context''' <br/> [[Image:ytzF_context.gif]]~~
−	~~<div align="right"> <small>~~This ~~image was kindly provided~~ by [http://~~genolist~~.~~pasteur~~.~~fr/SubtiList/ SubtiList]</small></div>~~
−	\|-
−	\|}
−
−	~~__TOC__~~
−
−	~~<br/><br/>~~
−
−	~~=The gene=~~
−
−	~~=== Basic information ===~~
−
−	* '''Locus tag:''' BSU30030
−
−	~~===Phenotypes of a mutant ===~~
−
−	~~=== Database entries ===~~
−
−	* '''DBTBS entry:''' no entry
−
−	* '''SubtiList entry:''' [http://genolist.~~pasteur~~.fr/~~SubtiList~~/~~genome~~.~~cgi?gene_detail+BG13940~~]
−
−	~~=== Additional information===~~
−
−
−	~~=The protein=~~
−
−	~~=== Basic information/ Evolution ===~~
−
−	* '''Catalyzed reaction/ biological activity:''' RNA uridine = RNA pseudouridine (~~according to Swiss-Prot~~)
−
−	* '''Protein family:''' pseudouridine synthase rsuA family (according to ~~Swiss-Prot)~~
−
−	* '''Paralogous protein(s):''' [[RluB]]
−
−	~~=== Extended information on the protein ===~~
−
−	* '''Kinetic information:'''
−
−	* '''Domains:'''
−
−	* '''Modification:'''
−
−	* '''Cofactor(s):'''
−
−	* '''Effectors of protein activity:'''
−
−	* '''Interactions:'''
−
−	* '''Localization:'''
−
−	~~=== Database entries ===~~
−
−	* '''Structure:'''
−
−	* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O32068 O32068]
−
−	* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU30030]
−
−	* '''E.C. number:'''
−
−	~~=== Additional information===~~
−
−	~~=Expression and regulation=~~
−
−	* '''Operon:'''
−
−	* '''[[Sigma factor]]:'''
−
−	* '''Regulation:'''
−
−	* '''Regulatory mechanism:'''
−
−	* '''Additional information:'''
−
−	~~=Biological materials =~~
−
−	* '''Mutant:'''
−
−	* '''Expression vector:'''
−
−	* '''lacZ fusion:'''
−
−	* '''GFP fusion:'''
−
−	* '''two-hybrid system:'''
−
−	* '''Antibody:'''
−
−	~~=Labs working on this gene/protein=~~
−
−	~~=Your additional remarks=~~
−
−	~~=References=~~
−
−	~~# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page.~~ [http://www.ncbi.nlm.nih.gov/sites/entrez/~~PMID PubMed~~]

@@ Line 36: / Line 36: @@
 === Basic information ===
-* '''Locus tag:'''
+* '''Locus tag:''' BSU30030
 ===Phenotypes of a mutant ===
@@ Line 81: / Line 81: @@
 * '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O32068 O32068]
-* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU30030 BSU30030]
+* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU30030]
 * '''E.C. number:'''

@@ Line 36: / Line 36: @@
 === Basic information ===
-* '''Coordinates:'''
+* '''Locus tag:'''
 ===Phenotypes of a mutant ===

@@ Line 53: / Line 53: @@
 === Basic information/ Evolution ===
-* '''Catalyzed reaction/ biological activity:'''
+* '''Catalyzed reaction/ biological activity:''' RNA uridine = RNA pseudouridine (according to Swiss-Prot)
 * '''Protein family:''' pseudouridine synthase rsuA family (according to Swiss-Prot)

@@ Line 55: / Line 55: @@
 * '''Catalyzed reaction/ biological activity:'''
-* '''Protein family:'''
+* '''Protein family:''' pseudouridine synthase rsuA family (according to Swiss-Prot)
 * '''Paralogous protein(s):''' [[RluB]]

@@ Line 91: / Line 91: @@
 * '''Operon:'''
-* '''Sigma factor:'''
+* '''[[Sigma factor]]:'''
 * '''Regulation:'''

@@ Line 24: / Line 24: @@
 |-
 |colspan="2" | '''Genetic context''' <br/> [[Image:ytzF_context.gif]]
 |-
 |}