TrnB-Arg - Revision history

134.76.38.147 at 15:21, 2 April 2014

2014-04-02T15:21:42Z

Jstuelk: /* Expression and regulation */

2012-08-02T09:14:32Z

‎Expression and regulation

Lflorez at 14:10, 8 December 2010

2010-12-08T14:10:55Z

Lflorez at 09:49, 1 December 2010

2010-12-01T09:49:06Z

Lflorez at 07:59, 21 July 2009

2009-07-21T07:59:33Z

Sroppel at 19:50, 15 June 2009

2009-06-15T19:50:45Z

Sroppel at 21:19, 8 June 2009

2009-06-08T21:19:52Z

Sroppel at 00:58, 3 June 2009

2009-06-03T00:58:30Z

Jstuelk: /* Expression and regulation */

2009-06-02T20:53:12Z

‎Expression and regulation

Sroppel at 17:41, 23 March 2009

2009-03-23T17:41:40Z

← Older revision		Revision as of 15:21, 2 April 2014
Line 1:		Line 1:
−	* '''Description:~~''' tRNA~~-Arg	+	{{#bank: TrnB-Arg}}

−	~~{\| align="right" border="1" cellpadding="2"~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\|'''Gene name'''~~
−	~~\|''trnB-Arg''~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Synonyms''' \|\| ''trnE ''~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Essential''' \|\| no~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Product''' \|\| transfer RNA-Arg~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\|'''Function''' \|\| translation~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Gene length''' \|\| 77 bp~~
−	~~\|-\|-~~
−
−	~~\|style="background:#ABCDEF;" align="center"\|'''Immediate neighbours''' \|\| ''[[trnB-Pro]]'', ''[[trnB-Gly1]]''~~
−	\|-
−	~~\|style="background:#FAF8CC;" align="center"\|'''[http://subtiwiki.uni-goettingen.de/trnB-Arg_nucleotide.txt Gene sequence (+200bp) ]'''~~
−	~~\|style="background:#FAF8CC;" align="center"\|''' '''~~
−	\|-
−	~~\|colspan="2" \| '''Genetic context''' <br/> [[Image:trnB-Arg_context.gif]]~~
−	~~<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>~~
−	\|-
−	\|}
−
−	~~__TOC__~~
−
−	~~<br/><br/>~~
−
−	~~<br/><br/><br/><br/><br/>~~
−	~~= [[Categories]] containing this gene/protein =~~
−	~~{{SubtiWiki category\|[[translation]]}}~~
−
−	~~= This gene is a member of the following [[regulons]] =~~
−
−
−	~~=The gene=~~
−
−	~~=== Basic information ===~~
−
−	* '''Locus tag:'''
−
−	~~===Phenotypes of a mutant ===~~
−
−	~~=== Database entries ===~~
−
−	* '''DBTBS entry:''' no entry
−
−	* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG00080]
−
−	* '''Structure:'''
−
−	~~=== Additional information===~~
−
−
−
−	~~=Expression and regulation=~~
−
−	* '''Operon:'''
−	** ''[[rrnB-16S]]-[[rrnB-23S]]- [[rrnB-5S]]-[[trnB-Val]]-[[trnB-Thr]]-[[trnB-Lys]]-[[trnB-Leu1]]-[[trnB-Leu2]]-[[trnB-Gly1]]-[[trnB-Arg]]-[[trnB-Pro]]-[[trnB-Ala]]-[[trnB-Met1]]-[[trnB-Met3]]-[[trnB-Ser1]]-[[trnB-Met2]]-[[trnB-Asp]]-[[trnB-Phe]]-[[trnB-His]]-[[trnB-Gly2]]-[[trnB-Ile2]]-[[trnB-Asn]]-[[trnB-Ser2]]-[[trnB-Glu]]'' {{PubMed\|2414156}}
−	** ''[[trnB-Lys]]-[[trnB-Leu1]]-[[trnB-Leu2]]-[[trnB-Gly1]]-[[trnB-Arg]]-[[trnB-Pro]]-[[trnB-Ala]]-[[trnB-Met1]]-[[trnB-Met3]]-[[trnB-Ser1]]-[[trnB-Met2]]-[[trnB-Asp]]-[[trnB-Phe]]-[[trnB-His]]-[[trnB-Gly2]]-[[trnB-Ile2]]-[[trnB-Asn]]-[[trnB-Ser2]]-[[trnB-Glu]]'' {{PubMed\|2414156}}
−
−	* '''Sigma factor:'''
−
−	* '''Regulation:'''
−
−	* '''Regulatory mechanism:'''
−
−	* '''Additional information:'''
−
−	~~=Biological materials =~~
−
−	* '''Mutant:'''
−
−	* '''Expression vector:'''
−
−	* '''lacZ fusion:'''
−
−	* '''GFP fusion:'''
−
−	* '''two-hybrid system:'''
−
−	* '''Antibody:'''
−
−	~~=Labs working on this gene/RNA=~~
−
−	~~=Your additional remarks=~~
−
−	~~=References=~~
−
−	~~<pubmed>2414156, </pubmed>~~
−
−	~~[[Category:Transfer RNA]]~~

← Older revision		Revision as of 09:14, 2 August 2012
Line 61:		Line 61:

	* '''Operon:'''		* '''Operon:'''
		+	** ''[[rrnB-16S]]-[[rrnB-23S]]- [[rrnB-5S]]-[[trnB-Val]]-[[trnB-Thr]]-[[trnB-Lys]]-[[trnB-Leu1]]-[[trnB-Leu2]]-[[trnB-Gly1]]-[[trnB-Arg]]-[[trnB-Pro]]-[[trnB-Ala]]-[[trnB-Met1]]-[[trnB-Met3]]-[[trnB-Ser1]]-[[trnB-Met2]]-[[trnB-Asp]]-[[trnB-Phe]]-[[trnB-His]]-[[trnB-Gly2]]-[[trnB-Ile2]]-[[trnB-Asn]]-[[trnB-Ser2]]-[[trnB-Glu]]'' {{PubMed\|2414156}}
		+	** ''[[trnB-Lys]]-[[trnB-Leu1]]-[[trnB-Leu2]]-[[trnB-Gly1]]-[[trnB-Arg]]-[[trnB-Pro]]-[[trnB-Ala]]-[[trnB-Met1]]-[[trnB-Met3]]-[[trnB-Ser1]]-[[trnB-Met2]]-[[trnB-Asp]]-[[trnB-Phe]]-[[trnB-His]]-[[trnB-Gly2]]-[[trnB-Ile2]]-[[trnB-Asn]]-[[trnB-Ser2]]-[[trnB-Glu]]'' {{PubMed\|2414156}}

	* '''Sigma factor:'''		* '''Sigma factor:'''

@@ Line 32: / Line 32: @@
 <br/><br/><br/><br/><br/>
 =The gene=
@@ Line 51: / Line 57: @@
-= Categories containing this gene/protein =
 =Expression and regulation=

← Older revision		Revision as of 09:49, 1 December 2010
Line 50:		Line 50:
	=== Additional information===		=== Additional information===

		+
		+	= Categories containing this gene/protein =
		+	{{SubtiWiki category\|[[translation]]}}
	=Expression and regulation=		=Expression and regulation=

← Older revision		Revision as of 07:59, 21 July 2009
Line 83:		Line 83:

	<pubmed>2414156, </pubmed>		<pubmed>2414156, </pubmed>
		+
		+	[[Category:Transfer RNA]]

← Older revision		Revision as of 19:50, 15 June 2009
Line 83:		Line 83:

	<pubmed>2414156, </pubmed>		<pubmed>2414156, </pubmed>
−	# Green CJ, Stewart GC, Hollis MA, Vold BS, Bott KF (1985) Nucleotide sequence of the ''Bacillus subtilis'' ribosomal RNA operon, ''rrnB''.''Nucl. Acids Res.'' '''37:''' 261-266. [http://www.ncbi.nlm.nih.gov/sites/entrez/2414156 PubMed]
−	~~# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]~~

@@ Line 82: / Line 82: @@
 =References=
 # Green CJ, Stewart GC, Hollis MA, Vold BS, Bott KF (1985) Nucleotide sequence of the ''Bacillus subtilis'' ribosomal RNA operon, ''rrnB''.''Nucl. Acids Res.'' '''37:''' 261-266. [http://www.ncbi.nlm.nih.gov/sites/entrez/2414156 PubMed]
 # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]

@@ Line 36: / Line 36: @@
 === Basic information ===
-* '''Coordinates:'''
+* '''Locus tag:'''
 ===Phenotypes of a mutant ===

@@ Line 52: / Line 52: @@
 =Expression and regulation=
-* '''Operon:''' ''rrnB'' (''[[trnB-Glu]]- [[trnB-Ser2]]- [[trnB-Asn]]- [[trnB-Ile2]]- [[trnB-Gly2]]- [[trnB-Phe]]- [[trnB-His]]- [[trnB-Asp]]- [[trnB-Met2]]- [[trnB-Ser1]]- [[trnB-Met3]]- [[trnB-Met1]]- [[trnB-Ala]]- [[trnB-Pro]]- [[trnB-Arg]]- [[trnB-Gly1]]- [[trnB-Leu2]]- [[trnB-Leu1]]- [[trnB-Lys]]- [[trnB-Thr]]- [[trnB-Val]]- [[rrnB-5S]]- [[rrnB-23S]]- [[rrnB-16S]]'')  [http://www.ncbi.nlm.nih.gov/sites/entrez/2414156 PubMed]
+* '''Operon:'''
 * '''Sigma factor:'''

@@ Line 23: / Line 23: @@
 |-
 |colspan="2" | '''Genetic context''' <br/> [[Image:trnB-Arg_context.gif]]
 |-
 |}