MgsR - Revision history

134.76.38.147 at 14:13, 2 April 2014

2014-04-02T14:13:09Z

2013-11-18T14:18:41Z

2013-09-15T19:11:54Z

2013-05-16T13:55:10Z

2013-05-14T10:43:29Z

2013-05-13T13:18:17Z

2012-08-07T11:41:20Z

2012-07-23T16:31:14Z

‎References

2012-07-23T16:30:12Z

2012-04-20T08:27:45Z

@@ Line 59: / Line 59: @@
 === Database entries ===
 * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yqgZ.html]
@@ Line 95: / Line 96: @@
 === Database entries ===
 * '''Structure:'''

@@ Line 16: / Line 16: @@
 |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24770 mgsR]
 |-
-|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/MgsR MgsR]
+|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=MgsR MgsR]
 |-
 |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 14 kDa, 9.28

@@ Line 1: / Line 1: @@
-* '''Description:''' transcriptional regulator of a subset of the [[SigB]] general stress regulon <br/><br/>
+* '''Description:''' transcriptional regulator of a subset of the [[SigB]] general stress regulon, required for protection against oxidative stress  <br/><br/>
 {| align="right" border="1" cellpadding="2"
@@ Line 43: / Line 43: @@
 = [[Categories]] containing this gene/protein =
 {{SubtiWiki category|[[transcription factors and their control]]}},
-{{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}}
+{{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}},
 = This gene is a member of the following [[regulons]] =
@@ Line 111: / Line 112: @@
 * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mgsR_2564026_2564406_-1 mgsR] {{PubMed|22383849}}
-* '''Sigma factor:''' [[SigB]] {{PubMed|18643936}}
+* '''[[Sigma factor]]:''' [[SigB]] {{PubMed|18643936}}
 * '''Regulation:'''
@@ Line 142: / Line 143: @@
 =References=
-'''Additional publications:''' {{PubMed|22812682}}
+<pubmed>18643936, 12107147 15805528 18643936,22812682 22582280</pubmed>
 [[Category:Protein-coding genes]]

@@ Line 31: / Line 31: @@
   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 |-
-|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mgsR_2564026_2564406_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:mgsR_expression.png|500px]]
+|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mgsR_2564026_2564406_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:mgsR_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24770]]
 |-
 |}

@@ Line 24: / Line 24: @@
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trnSL-Gln1]]'', ''[[yqgY]]''
 |-
-|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24770 Advanced_DNA]
+|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24770 DNA_with_flanks]
 |-
 |-

@@ Line 13: / Line 13: @@
 |-
 |style="background:#ABCDEF;" align="center"|'''Function''' || controls a subset of general stress genes
 |-
 |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/MgsR MgsR]

@@ Line 34: / Line 34: @@
 __TOC__
 <br/><br/><br/><br/>
 <br/><br/><br/><br/>
 <br/><br/><br/><br/>
 <br/><br/><br/><br/>
@@ Line 48: / Line 44: @@
 = This gene is a member of the following [[regulons]] =
-{{SubtiWiki regulon|[[SigB regulon]]}}
+{{SubtiWiki regulon|[[SigB regulon]]}},
 =The gene=
@@ Line 65: / Line 62: @@
 === Additional information===
 =The protein=
@@ Line 86: / Line 80: @@
 * '''Modification:'''
 * '''Cofactor(s):'''
@@ Line 121: / Line 116: @@
 * '''Regulatory mechanism:'''
+** MgsR: transcription activation {{PubMed|22812682}}
 * '''Additional information:'''
 =Biological materials =
@@ Line 144: / Line 141: @@
 =References=
-<pubmed>18643936,,12107147 15805528 18643936, </pubmed>
+<pubmed>18643936, 22812682,12107147 15805528 18643936, </pubmed>
 [[Category:Protein-coding genes]]